I think I get it now. The needle remains stationary relative to the diaphragm, but the diaphragm moves in and out as the rider changes throttle position. I'm guessing that when throttle is applied, that the diaphragms move inward causing the needle to move inward as well, right? By shimming the needle, it cannot go in as far as in the stock condition, so more fuel can flow, right? See, my problem is that I don't feel comfortable messing with my carbs until I understand how they work. According to the dyno chart, it appears that the carbs went rich at the midrange and most likely the Mark's pipes may have made it richer yet.
If I'm understanding the information you both put up, then I think the correct course of action would be to adjust the A/F screws and leave the needles alone for now until I can get it back on a dyno.
As a sidenote, KJShover, I'm not convinced that my bike is making as much HP as the chart says, it was a portable dyno and it could have been out of calibration or set up to show higher than normal readings just to make people feel good. I will get it confirmed at a place that has a fixed dyno. Specops13 great picture, I have it downloaded and in my vmax folder.