Now, if you find that you have a problem where you get no-resistance 1/2-way back, and then there is resistance, and pulling the lever fully to the bar doesn't release the clutch, you have most-likely a bad seal in either the master cyl, or the slave cyl. Secondary issues could be a bad joint at one of the banjos (the crush washers should be replaced when you disassemble the fittings, but there are alternatives. If the copper crush washers have ridges on them from their last use, you can try surface-sanding them down smooth. Some report success w/annealing them w/a propane torch and quenching them w/H2O. The goal is to get a smooth surface to enable a seal. Your local auto parts store should have packages of the hydraulic fitting washers, just take one to match. I've found the auto store ones are often quite a bit thicker than the stock Yamaha ones, not-enough to upset the alignment of the fluid passageways and the banjo bolt, but something to look-for). Rarely will you discover a bad hose, but it can happen. They can swell internally, allowing fluid to penetrate the plies of the hose, instead of going to move the pushrod. Another effect that may occur is the hose can collapse, and not-allow the release of pressure. The pushrod stays partially-activated-result is clutch slip. On the brake circuit side, a locked caliper/calipers.
I also found-out the hard way, one time I had a low level of brake fluid in the master cyl, and due to the angle I commonly left the handlebar, one of the master cyl holes in the bottom of the cyl was exposed, allowing infiltration of air overnight, and a resultant mushy-lever. To look at the sight glass, it appeared there was sufficient fluid showing, when I positioned the bars in the straight-ahead normal riding position, but when I actually placed the open-cap master cyl in the stationary/non-use position of the handlebars, I saw the hole exposed. A simple fix, add more fluid.
Also, change your fluids each riding season, it removes water along with the brake fluid and other contaminants, lessening the potential of corrosion internally. Prudence would dictate doing it before you store the bike for 6 months, so the water and contaminants cannot do their bad-deeds during the prolonged layoff. A bonus, in the spring, "ready-to-ride!"
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